AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS CHICKEN-R6OA3Q

SpeciesCHICKEN
TypeV-RS · complete signal, 3' of V (30 nt)
Sources IMGT
CGCAGTG HEPTAMER 7 nt GTAGTGGTTGTTGT spacer · 14 nt AATGCTTAC NONAMER 9 nt
Heptamer Spacer (14 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

30 nt
CGCAGTGGTAGTGGTTGTTGTAATGCTTAC

Find similar RSS

Alleles with this RSS variant

3 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV1-35*01 CHICKEN IGH IMGT CHICKEN-VIQWLM2EG
IGHV1-35*02 CHICKEN IGH IMGT CHICKEN-VSPBXLGSC
IGHV1-66*02 CHICKEN IGH IMGT CHICKEN-VH7FEAI3W