AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS COW-R6JM5M

SpeciesCOW
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt CTCCCCAGGCACCTGCAGCCTCT spacer · 23 nt ACACAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGCTCCCCAGGCACCTGCAGCCTCTACACAAACC

Find similar RSS

Alleles with this RSS variant

9 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
TRAV22-1*01 COW TRA IMGT COW-VIRRE6B3O
TRAV22-1*03 COW TRA IMGT COW-VWKZ2UFK3
TRAV22-14*01 COW TRA IMGT COW-VI3VWFAF6
TRAV22-14*02 COW TRA IMGT COW-V445PDZ5A
TRAV22-15*01 COW TRA IMGT COW-VVWJJDIIF
TRAV22-4*01 COW TRA IMGT COW-V2TMEEEK3
TRAV22-8*01 COW TRA IMGT COW-VPJNSWB55
TRAV22-9*01 COW TRA IMGT COW-VKZO3R45J
TRAV22-9*02 COW TRA IMGT COW-VO7KKKQKC