AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS COW-RDXXYD

SpeciesCOW
TypeV-RS · complete signal, 3' of V (38 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt CTGCGCGTCAGCTCTTCTTAGA spacer · 22 nt GCACAAACT NONAMER 9 nt
Heptamer Spacer (22 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

38 nt
CACAGTGCTGCGCGTCAGCTCTTCTTAGAGCACAAACT

Find similar RSS

Alleles with this RSS variant

6 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
TRBV21-17*01 COW TRB IMGT COW-VGOHRKP5Y
TRBV21-18*01 COW TRB IMGT COW-VSUW6P7MW
TRBV21-20*01 COW TRB IMGT COW-VNK7OCGXQ
TRBV21-22*01 COW TRB IMGT COW-VIDKNJNYA
TRBV21-4*01 COW TRB IMGT COW-VAVJEBT5D
TRBV21-6*01 COW TRB IMGT COW-VG3AQYCUP