AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS COW-RIUQFP

SpeciesCOW
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt AGAGAGGGCTGCGGGGGAGCTGA spacer · 23 nt GCACAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGAGAGAGGGCTGCGGGGGAGCTGAGCACAAACC

Find similar RSS

Alleles with this RSS variant

9 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
TRAV45-11*01 COW TRA IMGT COW-VFZ22Y5KH
TRAV45-2*01 COW TRA IMGT COW-VZEFC37KK
TRAV45-2*02 COW TRA IMGT COW-VE633LTEX
TRAV45-4*01 COW TRA IMGT COW-VLBOSRIWA
TRAV45-6*01 COW TRA IMGT COW-VHTHAP4XL
TRAV45-6*02 COW TRA IMGT COW-VMD6DLPWT
TRAV45-7*01 COW TRA IMGT COW-VDYIGN34R
TRAV45-9*01 COW TRA IMGT COW-VYZQHHJIX
TRAV45-9*02 COW TRA IMGT COW-V5ZATQZ3A