AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS COW-RLSXMY

SpeciesCOW
TypeJ-RS · complete signal, 5' of J (28 nt)
Sources IMGT
GGTTTTTGC NONAMER 9 nt TGAGCTGAAGAT spacer · 12 nt CACTGTG HEPTAMER 7 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
GGTTTTTGCTGAGCTGAAGATCACTGTG

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Alleles with this RSS variant

2 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
TRAJ33*01 COW TRA IMGT COW-JYP5P3GTJ
TRAJ39*02 COW TRA IMGT COW-J4FYFBHGL