AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS COW-RMKIUR

SpeciesCOW
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGCC HEPTAMER 7 nt CTGCATGATCAGGTGCCTCTGGG spacer · 23 nt ACAAAAACA NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGCCCTGCATGATCAGGTGCCTCTGGGACAAAAACA

Find similar RSS

Alleles with this RSS variant

7 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
TRBV5-10*01 COW TRB IMGT COW-VF3SJEJB4
TRBV5-11*01 COW TRB IMGT COW-VVTYJNZ3I
TRBV5-14*01 COW TRB IMGT COW-VYI4XTEXD
TRBV5-17*01 COW TRB IMGT COW-VUA5CWCLN
TRBV5-18*01 COW TRB IMGT COW-V4334HTKF
TRBV5-2*01 COW TRB IMGT COW-V4AJBBRLO
TRBV5-7*01 COW TRB IMGT COW-VNCYB3J2J