AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS COW-RWMUFG

SpeciesCOW
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt CTCCAGGCCAGGGGGGAAGTGAG spacer · 23 nt ACAAAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGCTCCAGGCCAGGGGGGAAGTGAGACAAAAACC

Find similar RSS

Alleles with this RSS variant

12 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGLV1-21*01 COW IGL IMGT COW-VQDFSODZC
IGLV1-28*01 COW IGL IMGT COW-VG4V7MHRK
IGLV1-36*01 COW IGL IMGT COW-VPQCUJL22
IGLV1-40*01 COW IGL IMGT COW-V54H4ZBXW
IGLV1-46*01 COW IGL IMGT COW-VQFXSTXEA
IGLV1-47*01 COW IGL IMGT COW-VVMPIMFBZ
IGLV1-51*01 COW IGL IMGT COW-VE5Z3J2UE
IGLV1-58*01 COW IGL IMGT COW-VVUUOHNVJ
IGLV1-60*01 COW IGL IMGT COW-VG6W7CGPP
IGLV1-61*01 COW IGL IMGT COW-VZZ4Y7USS
IGLV1-67*01 COW IGL IMGT COW-VULL6AZZ4
IGLV1-67*02 COW IGL IMGT COW-VFEJPZG4X