AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS GRASSCARP-R2KDLY

SpeciesGRASSCARP
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACTGTA HEPTAMER 7 nt CCACAAACTGCCACAGGACCTGC spacer · 23 nt ACAAGAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACTGTACCACAAACTGCCACAGGACCTGCACAAGAACC

Find similar RSS

Alleles with this RSS variant

5 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV8-41*01 GRASSCARP IGH IMGT GRASSCARP-VYRGO7OBV
IGHV8-65*01 GRASSCARP IGH IMGT GRASSCARP-VAG2YU7IB
IGHV8-81*01 GRASSCARP IGH IMGT GRASSCARP-VPJUAVKDE
IGHV8-92*01 GRASSCARP IGH IMGT GRASSCARP-VEJTTWSNE
IGHV8-98*01 GRASSCARP IGH IMGT GRASSCARP-VGJUK47ZU