AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS GRASSCARP-RBDK4S

SpeciesGRASSCARP
TypeV-RS · complete signal, 3' of V (40 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt ACTGAAATGACTGCAGCGCTGTGC spacer · 24 nt ACAAAAACT NONAMER 9 nt
Heptamer Spacer (24 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

40 nt
CACAGTGACTGAAATGACTGCAGCGCTGTGCACAAAAACT

Find similar RSS

Alleles with this RSS variant

8 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV10-103*01 GRASSCARP IGH IMGT GRASSCARP-VAKNK3M5T
IGHV10-109*01 GRASSCARP IGH IMGT GRASSCARP-VYU37WK6F
IGHV10-112*01 GRASSCARP IGH IMGT GRASSCARP-VNGRRZGSV
IGHV10-44*01 GRASSCARP IGH IMGT GRASSCARP-VS72DKB4P
IGHV10-63*01 GRASSCARP IGH IMGT GRASSCARP-VCEPAPCQ5
IGHV10-79*01 GRASSCARP IGH IMGT GRASSCARP-VARS72HKS
IGHV10-90*01 GRASSCARP IGH IMGT GRASSCARP-VDKO35OKV
IGHV10-96*01 GRASSCARP IGH IMGT GRASSCARP-VXDRCFCXX