AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS GRASSCARP-RWDHOA

SpeciesGRASSCARP
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACTGTG HEPTAMER 7 nt GAAACACTAATACAGGCAGCTGT spacer · 23 nt TCAAAAACT NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACTGTGGAAACACTAATACAGGCAGCTGTTCAAAAACT

Find similar RSS

Alleles with this RSS variant

11 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV9-102*01 GRASSCARP IGH IMGT GRASSCARP-VOB63LPLC
IGHV9-105*01 GRASSCARP IGH IMGT GRASSCARP-VRTB7AVFF
IGHV9-108*01 GRASSCARP IGH IMGT GRASSCARP-VHPAJM3FU
IGHV9-111*01 GRASSCARP IGH IMGT GRASSCARP-VIUG7KDWM
IGHV9-34*01 GRASSCARP IGH IMGT GRASSCARP-V6KKNPC4P
IGHV9-40*01 GRASSCARP IGH IMGT GRASSCARP-V2OPZXCMQ
IGHV9-43*01 GRASSCARP IGH IMGT GRASSCARP-V4MEBLKUM
IGHV9-56*01 GRASSCARP IGH IMGT GRASSCARP-V56A3J6RT
IGHV9-62*01 GRASSCARP IGH IMGT GRASSCARP-VGLLYJGFN
IGHV9-84*01 GRASSCARP IGH IMGT GRASSCARP-V74NGH622
IGHV9-89*01 GRASSCARP IGH IMGT GRASSCARP-VDJUULJ7J