AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS GRASSCARP-RZNNZI

SpeciesGRASSCARP
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt ACAGACGCAAACAGCCTCCCTGT spacer · 23 nt ACAAAAACA NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGACAGACGCAAACAGCCTCCCTGTACAAAAACA

Find similar RSS

Alleles with this RSS variant

17 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV15-124*01 GRASSCARP IGH IMGT GRASSCARP-VZ7IKY4CS
IGHV15-131*01 GRASSCARP IGH IMGT GRASSCARP-VLZCTQXR7
IGHV15-134*01 GRASSCARP IGH IMGT GRASSCARP-V4RTM7ZFI
IGHV15-136*01 GRASSCARP IGH IMGT GRASSCARP-VOU2UXR6Y
IGHV15-140*01 GRASSCARP IGH IMGT GRASSCARP-VWIRS7INW
IGHV15-142*01 GRASSCARP IGH IMGT GRASSCARP-VGRDBYQ3A
IGHV15-144*01 GRASSCARP IGH IMGT GRASSCARP-VAAP3L2GT
IGHV15-149*01 GRASSCARP IGH IMGT GRASSCARP-VEBGN4ANE
IGHV15-150*01 GRASSCARP IGH IMGT GRASSCARP-VTVBXRRHA
IGHV15-151*01 GRASSCARP IGH IMGT GRASSCARP-VVDG4HROW
IGHV15-152*01 GRASSCARP IGH IMGT GRASSCARP-VRN7SNEW2
IGHV15-154*01 GRASSCARP IGH IMGT GRASSCARP-VPPQ4NECH
IGHV15-156*01 GRASSCARP IGH IMGT GRASSCARP-VPHTSQGSA
IGHV15-157*01 GRASSCARP IGH IMGT GRASSCARP-VT6MHXDXJ
IGHV15-159*01 GRASSCARP IGH IMGT GRASSCARP-VSLK6F7NJ
IGHV15-162*01 GRASSCARP IGH IMGT GRASSCARP-V5KEIWU3E
IGHV15-163*01 GRASSCARP IGH IMGT GRASSCARP-VKLZR6PLJ