AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS HUMAN-RCX5GO

SpeciesHUMAN
TypeV-RS · complete signal, 3' of V (28 nt)
Sources HUSA IMGT
CACAGTG HEPTAMER 7 nt TTACACACCCGA spacer · 12 nt ACAAAAACC NONAMER 9 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
CACAGTGTTACACACCCGAACAAAAACC

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Alleles with this RSS variant

14 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGKV1-NL1*01 HUMAN IGK HUSA IMGT HUMAN-VT6W6NR47
IGKV1D-8*01 HUMAN IGK HUSA IMGT HUMAN-VCB6XLU6M
IGKV1D-8*02 HUMAN IGK HUSA IMGT HUMAN-V7UUTO56O
IGKV1D-8*03 HUMAN IGK HUSA IMGT HUMAN-VEMDIZNPC
IGKV1-BK4T*02 HUMAN IGK HUSA HUMAN-V3PPTLCG3
IGKV1-BK4T*03 HUMAN IGK HUSA HUMAN-VS7SNQLLY
IGKV1D-8*04 HUMAN IGK HUSA HUMAN-VTNNEADHP
IGKV1-BK4T*12 HUMAN IGK HUSA HUMAN-VHMVIULBT
IGKV1-BK4T*13 HUMAN IGK HUSA HUMAN-VKF7BMN4Y
IGKV1-BK4T*14 HUMAN IGK HUSA HUMAN-V45C4N5TE
IGKV1-BK4T*15 HUMAN IGK HUSA HUMAN-VVLPFFELX
IGKV1-BK4T*18 HUMAN IGK HUSA HUMAN-VM4LZSO7O
IGKV1-BK4T*20 HUMAN IGK HUSA HUMAN-V5AQXZAPZ
IGKV1-BK4T*21 HUMAN IGK HUSA HUMAN-VHICUG6YW