AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS HUMAN-RIAUVG

SpeciesHUMAN
TypeV-RS · complete signal, 3' of V (39 nt)
Sources HUSA IMGT
CACAGTG HEPTAMER 7 nt AGGGGAGGTCAATGTGAGCCCAG spacer · 23 nt ACACAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGAGGGGAGGTCAATGTGAGCCCAGACACAAACC

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Alleles with this RSS variant

7 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV3-49*05 HUMAN IGH HUSA IMGT HUMAN-V3OVZQTDN
IGHV3-49*03 HUMAN IGH HUSA IMGT HUMAN-VH64XIUIU
IGHV3-49*03_S9360 HUMAN IGH HUSA HUMAN-V2I6HQK23
IGHV3-49*03_S4101 HUMAN IGH HUSA HUMAN-VEAGBX4MV
IGHV3-M7QC*05 HUMAN IGH HUSA HUMAN-VEUKUQYUL
IGHV3-49*04 HUMAN IGH HUSA HUMAN-VGNJ2WUUZ
IGHV3-49*05_S0455 HUMAN IGH HUSA HUMAN-VQ5QYAK22