AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS HUMAN-ROFJ7N

SpeciesHUMAN
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAATG HEPTAMER 7 nt AGGGGAGGTGAGTGTGAGCCCAG spacer · 23 nt ACACAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAATGAGGGGAGGTGAGTGTGAGCCCAGACACAAACC

Find similar RSS

Alleles with this RSS variant

7 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV4-30-2*01 HUMAN IGH IMGT HUMAN-V5OW26GE5
IGHV4-30-2*06 HUMAN IGH IMGT HUMAN-VFENXPSTC
IGHV4-30-2*07 HUMAN IGH IMGT HUMAN-VTMMHQNLV
IGHV4-30-4*07 HUMAN IGH IMGT HUMAN-V2NVSDNNT
IGHV4-30-4*10 HUMAN IGH IMGT HUMAN-VB4D5Z72G
IGHV4-30-4*09 HUMAN IGH IMGT HUMAN-VEMPTMHCT
IGHV4-31*13 HUMAN IGH IMGT HUMAN-VAQHZ2QR3