AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS MOUSE-R3MUUP

SpeciesMOUSE
TypeV-RS · complete signal, 3' of V (28 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt CTCCAGGGCTGA spacer · 12 nt ACAAAAACC NONAMER 9 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
CACAGTGCTCCAGGGCTGAACAAAAACC

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Alleles with this RSS variant

7 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGKV3-1*01 MOUSE IGK IMGT MOUSE-VDUG4NYTY
IGKV3-10*01 MOUSE IGK IMGT MOUSE-V7HRUXUDU
IGKV3-2*01 MOUSE IGK IMGT MOUSE-VKDZI4LTE
IGKV3-3*01 MOUSE IGK IMGT MOUSE-VJYWKUHXU
IGKV3-4*01 MOUSE IGK IMGT MOUSE-V26QTWEHO
IGKV3-5*01 MOUSE IGK IMGT MOUSE-VIEKONQ36
IGKV3-7*02 MOUSE IGK IMGT MOUSE-VK6EWY4VX