AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS MOUSE-RD7NXH

SpeciesMOUSE
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt AGGGAAGTCCATTATGAACTTGA spacer · 23 nt ACAAAAATT NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGAGGGAAGTCCATTATGAACTTGAACAAAAATT

Find similar RSS

Alleles with this RSS variant

5 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV2-2*01 MOUSE IGH IMGT MOUSE-VGYQYISDL
IGHV2-2*02 MOUSE IGH IMGT MOUSE-V6VIU6ZZ2
IGHV2-2-2*01 MOUSE IGH IMGT MOUSE-VTGT3MOAV
IGHV2-2-2*02 MOUSE IGH IMGT MOUSE-VW2WWMXJ2
IGHV2-4*01 MOUSE IGH IMGT MOUSE-VUXMNSW7N