AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS MOUSE-RFPZRD

SpeciesMOUSE
TypeV-RS · complete signal, 3' of V (28 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt CTTCAGCCTCCT spacer · 12 nt ACACAAACC NONAMER 9 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
CACAGTGCTTCAGCCTCCTACACAAACC

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Alleles with this RSS variant

12 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGKV6-17*01 MOUSE IGK IMGT MOUSE-V2GORKCPA
IGKV6-32*01 MOUSE IGK IMGT MOUSE-VSJBNS5S6
IGKV6-32*02 MOUSE IGK IMGT MOUSE-VJPTLUDE4
IGKV6-b*01 MOUSE IGK IMGT MOUSE-VQCSG2RG7
IGKV6-d*01 MOUSE IGK IMGT MOUSE-VQ65MXYRZ
IGKV7-33*01 MOUSE IGK IMGT MOUSE-VXGMW2MWL
IGKV8-16*01 MOUSE IGK IMGT MOUSE-VRDUQ3OLY
IGKV8-19*01 MOUSE IGK IMGT MOUSE-VUB6LKU6V
IGKV8-23-1*01 MOUSE IGK IMGT MOUSE-V7I5TKGPU
IGKV8-28*01 MOUSE IGK IMGT MOUSE-VUT57CFAN
IGKV8-28*03 MOUSE IGK IMGT MOUSE-VYCWQBWR3
IGKV8-30*01 MOUSE IGK IMGT MOUSE-V67RXUXLS