AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS MOUSE-RH6QHP

SpeciesMOUSE
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAATG HEPTAMER 7 nt AGGAAATGTTACTGTGAGCTCAA spacer · 23 nt ACTAAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAATGAGGAAATGTTACTGTGAGCTCAAACTAAAACC

Find similar RSS

Alleles with this RSS variant

10 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV5-12*01 MOUSE IGH IMGT MOUSE-VVRSMJ2VJ
IGHV5-12*02 MOUSE IGH IMGT MOUSE-VLEBWQA6V
IGHV5-4*01 MOUSE IGH IMGT MOUSE-V4VJMNR3Y
IGHV5-4*02 MOUSE IGH IMGT MOUSE-VAIQGPATV
IGHV5-4*04 MOUSE IGH IMGT MOUSE-VCE3FMUJY
IGHV5-6*01 MOUSE IGH IMGT MOUSE-VDGMM3KBZ
IGHV5-6-3*01 MOUSE IGH IMGT MOUSE-V2K5LVGEV
IGHV5-6-4*01 MOUSE IGH IMGT MOUSE-VW7XRIEKE
IGHV5-9-1*02 MOUSE IGH IMGT MOUSE-VSR566ZV3
IGHV5-9-3*01 MOUSE IGH IMGT MOUSE-VYX6YK4S4