AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS MOUSE-RIXVZY

SpeciesMOUSE
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt TTGCAACCACATCCTGAGAGTGT spacer · 23 nt CAGAAACCC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGTTGCAACCACATCCTGAGAGTGTCAGAAACCC

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Alleles with this RSS variant

8 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV1-71-6*01 MOUSE IGH IMGT MOUSE-VBW3XREPE
IGHV1-71-3*01 MOUSE IGH IMGT MOUSE-VJ3RNH5JM
IGHV1-69-8*01 MOUSE IGH IMGT MOUSE-VL5W4XSZI
IGHV1-47-44*01 MOUSE IGH IMGT MOUSE-VSFYHAFIP
IGHV1-47-43*01 MOUSE IGH IMGT MOUSE-VKGHLQWYO
IGHV1-47-37*01 MOUSE IGH IMGT MOUSE-VFGE4BJAU
IGHV1-47-27*01 MOUSE IGH IMGT MOUSE-VI5III4HT
IGHV1-47-18*01 MOUSE IGH IMGT MOUSE-VZ5IGK2IJ