AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS MOUSE-RKRMUT

SpeciesMOUSE
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAATG HEPTAMER 7 nt AATGGACTTCCCTGTGAAACTAG spacer · 23 nt ACATAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAATGAATGGACTTCCCTGTGAAACTAGACATAAACC

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Alleles with this RSS variant

6 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV11-1*02 MOUSE IGH IMGT MOUSE-VVIY544HK
IGHV11-1*03 MOUSE IGH IMGT MOUSE-VHBUDV4K2
IGHV11-2*01 MOUSE IGH IMGT MOUSE-VVSWCU4AA
IGHV11-2*02 MOUSE IGH IMGT MOUSE-VPXOL6VKX
IGHV11-2*03 MOUSE IGH IMGT MOUSE-VRUIX3XZF
IGHV11-2-1*01 MOUSE IGH IMGT MOUSE-VALE35UAA