AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

RSS MOUSE-RMFCM6

SpeciesMOUSE
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt CTCCCAGCAAGGCTGGAGCCTGG spacer · 23 nt CCCCAAACT NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGCTCCCAGCAAGGCTGGAGCCTGGCCCCAAACT

Find similar RSS

Alleles with this RSS variant

5 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
TRAV4-3*01 MOUSE TRA IMGT MOUSE-VF7VHDVVL
TRAV4-4/DV10*01 MOUSE TRA IMGT MOUSE-VDBSQWD5M
TRAV4-4/DV10*02 MOUSE TRA IMGT MOUSE-VMUVX6IIV
TRAV4D-3*06 MOUSE TRA IMGT MOUSE-VKP4J2ICS
TRAV4D-4*03 MOUSE TRA IMGT MOUSE-VTM3DVGAG