AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS MOUSE-RPMBR5

SpeciesMOUSE
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt CTACAAACACATCCTGAGTGTGT spacer · 23 nt CAGAAACCC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGCTACAAACACATCCTGAGTGTGTCAGAAACCC

Find similar RSS

Alleles with this RSS variant

7 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV1-18-26*01 MOUSE IGH IMGT MOUSE-VYL6RQTGS
IGHV1-18-58*01 MOUSE IGH IMGT MOUSE-VHRM2ZKCJ
IGHV1-18-60*01 MOUSE IGH IMGT MOUSE-VH2ORV2SC
IGHV1-18-74*01 MOUSE IGH IMGT MOUSE-VQB2RKI6V
IGHV1-18-80*01 MOUSE IGH IMGT MOUSE-VETR3DL7M
IGHV1-26*01 MOUSE IGH IMGT MOUSE-VGE3Z5PUL
IGHV1-86*02 MOUSE IGH IMGT MOUSE-V4PDMHTYB