AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS MOUSE-RY45OZ

SpeciesMOUSE
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt AGGGAGACTGCAGGGGAAGCTGC spacer · 23 nt ACATGAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGAGGGAGACTGCAGGGGAAGCTGCACATGAACC

Find similar RSS

Alleles with this RSS variant

11 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
TRAV12-1*01 MOUSE TRA IMGT MOUSE-V3WKQUDLU
TRAV12-1*02 MOUSE TRA IMGT MOUSE-VKZJSS545
TRAV12-1*06 MOUSE TRA IMGT MOUSE-V2QMUOHLR
TRAV12-2*01 MOUSE TRA IMGT MOUSE-VNRPJEDHE
TRAV12-2*02 MOUSE TRA IMGT MOUSE-VNIU4ADYW
TRAV12-3*01 MOUSE TRA IMGT MOUSE-VSZJOIM52
TRAV12-3*05 MOUSE TRA IMGT MOUSE-VQQVUM26E
TRAV12D-1*02 MOUSE TRA IMGT MOUSE-V6SBAIUHQ
TRAV12D-3*02 MOUSE TRA IMGT MOUSE-V364NY3GJ
TRAV12D-3*04 MOUSE TRA IMGT MOUSE-VVTP4D3OK
TRAV12D-2*02 MOUSE TRA IMGT MOUSE-VNVZKPWZW