AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS MOUSE-RZPHTU

SpeciesMOUSE
TypeV-RS · complete signal, 3' of V (28 nt)
Sources IMGT
CACACTG HEPTAMER 7 nt ATACAGCCCTGA spacer · 12 nt ACAAAAACA NONAMER 9 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
CACACTGATACAGCCCTGAACAAAAACA

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Alleles with this RSS variant

5 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGKV2-109*01 MOUSE IGK IMGT MOUSE-VC72OWTH6
IGKV2-109*02 MOUSE IGK IMGT MOUSE-VVJAMTAAN
IGKV2-109*03 MOUSE IGK IMGT MOUSE-VNEAF6YLC
IGKV2-109*04 MOUSE IGK IMGT MOUSE-VFTM2Z5IN
IGKV2-116*01 MOUSE IGK IMGT MOUSE-VXJYCGAFH