AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS MOUSE-RZZ2SV

SpeciesMOUSE
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt CTCCCCACACACCTGCAGCCCGC spacer · 23 nt ACACAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGCTCCCCACACACCTGCAGCCCGCACACAAACC

Find similar RSS

Alleles with this RSS variant

6 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
TRAV13D-1*01 MOUSE TRA IMGT MOUSE-VLIXXEFUP
TRAV13D-1*04 MOUSE TRA IMGT MOUSE-VXY46UPLY
TRAV13D-3*01 MOUSE TRA IMGT MOUSE-VQISIBV43
TRAV13D-4*01 MOUSE TRA IMGT MOUSE-VDJN2VIPW
TRAV13N-1*01 MOUSE TRA IMGT MOUSE-VBQEVLDAR
TRAV13N-4*01 MOUSE TRA IMGT MOUSE-V2P7RPD5M