AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS ORANGBOR-R5BURW

SpeciesORANGBOR
Type5'D-RS · complete signal, 5' of D (28 nt)
Sources IMGT
GGTTTGGGG NONAMER 9 nt TGAGGTCTGTGT spacer · 12 nt CACTGTG HEPTAMER 7 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
GGTTTGGGGTGAGGTCTGTGTCACTGTG

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Alleles with this RSS variant

5 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHD3-14*01 ORANGBOR IGH IMGT ORANGBOR-DXJLPK6G3
IGHD3-14*02 ORANGBOR IGH IMGT ORANGBOR-DBM4KUWKJ
IGHD3-2*01 ORANGBOR IGH IMGT ORANGBOR-DBF3NQBEG
IGHD3-20*01 ORANGBOR IGH IMGT ORANGBOR-DRASMYPLV
IGHD3-8*01 ORANGBOR IGH IMGT ORANGBOR-DOLS474NB