AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS ORANGBOR-RAIL2W

SpeciesORANGBOR
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt AGGGGAGGTGAGTGTGAGCCCAG spacer · 23 nt ACAAAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGAGGGGAGGTGAGTGTGAGCCCAGACAAAAACC

Find similar RSS

Alleles with this RSS variant

15 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV4-101*01 ORANGBOR IGH IMGT ORANGBOR-VZEZIFRZZ
IGHV4-101*02 ORANGBOR IGH IMGT ORANGBOR-VGCCFCRVU
IGHV4-103-1*01 ORANGBOR IGH IMGT ORANGBOR-VSIOTIJQA
IGHV4-103-1*02 ORANGBOR IGH IMGT ORANGBOR-V24XCELE6
IGHV4-103-11*01 ORANGBOR IGH IMGT ORANGBOR-VI66SQCRO
IGHV4-103-13*01 ORANGBOR IGH IMGT ORANGBOR-VOOGUPUUI
IGHV4-103-3*01 ORANGBOR IGH IMGT ORANGBOR-VYPDISPAN
IGHV4-104*02 ORANGBOR IGH IMGT ORANGBOR-VRZHMRNFR
IGHV4-109*01 ORANGBOR IGH IMGT ORANGBOR-VJM7PW7VS
IGHV4-109*02 ORANGBOR IGH IMGT ORANGBOR-V2EEAJLUZ
IGHV4-55*02 ORANGBOR IGH IMGT ORANGBOR-VPIVO4OSN
IGHV4-95*01 ORANGBOR IGH IMGT ORANGBOR-VIX7FD5KF
IGHV4-95*02 ORANGBOR IGH IMGT ORANGBOR-VYJFDW6JP
IGHV4-99*01 ORANGBOR IGH IMGT ORANGBOR-V7NJYECAT
IGHV4-99*02 ORANGBOR IGH IMGT ORANGBOR-VCJ43P6K7