AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

RSS ORANGBOR-RBC5TX

SpeciesORANGBOR
TypeV-RS · complete signal, 3' of V (28 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt ATTCAACATGAA spacer · 12 nt ACAAAAACC NONAMER 9 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
CACAGTGATTCAACATGAAACAAAAACC

Find similar RSS

Alleles with this RSS variant

8 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGKV3-12*01 ORANGBOR IGK IMGT ORANGBOR-VLI5VYYK2
IGKV3-12*02 ORANGBOR IGK IMGT ORANGBOR-V6BCORYGO
IGKV3-15*01 ORANGBOR IGK IMGT ORANGBOR-VUVMFXLVZ
IGKV3-21*01 ORANGBOR IGK IMGT ORANGBOR-VF5N6THGI
IGKV3-21*02 ORANGBOR IGK IMGT ORANGBOR-VXZ5KMWXP
IGKV3-26*01 ORANGBOR IGK IMGT ORANGBOR-VRRATJGDC
IGKV3-7*01 ORANGBOR IGK IMGT ORANGBOR-VCMCBPAU4
IGKV3-7*02 ORANGBOR IGK IMGT ORANGBOR-VXVVXLO24