AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS ORANGBOR-RFMFNZ

SpeciesORANGBOR
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAATG HEPTAMER 7 nt AGGGGAGGTGAGTGTGAGCCCAG spacer · 23 nt ACAAAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAATGAGGGGAGGTGAGTGTGAGCCCAGACAAAAACC

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Alleles with this RSS variant

2 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV4-103-8*01 ORANGBOR IGH IMGT ORANGBOR-VIOKMW2F2
IGHV4-55*01 ORANGBOR IGH IMGT ORANGBOR-VUDOPJQGG