AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS ORANGBOR-RN6PYN

SpeciesORANGBOR
TypeJ-RS · complete signal, 5' of J (37 nt)
Sources IMGT
GTGTTTTGG NONAMER 9 nt GGCTAACAGCAGAAGGGAGAG spacer · 21 nt CACTGGC HEPTAMER 7 nt
Heptamer Spacer (21 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

37 nt
GTGTTTTGGGGCTAACAGCAGAAGGGAGAGCACTGGC

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Alleles with this RSS variant

2 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHJ1*01 ORANGBOR IGH IMGT ORANGBOR-JKI4PIFTB
IGHJ1*02 ORANGBOR IGH IMGT ORANGBOR-JY5J2ZPOD