AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS ORANGSUM-R6AAZB

SpeciesORANGSUM
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt AGGGGAGGTCAGTGTGAGCCCAG spacer · 23 nt ACACAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGAGGGGAGGTCAGTGTGAGCCCAGACACAAACC

Find similar RSS

Alleles with this RSS variant

15 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV3-115-4*01 ORANGSUM IGH IMGT ORANGSUM-V5NJRWD3G
IGHV3-115-8*01 ORANGSUM IGH IMGT ORANGSUM-V5W3RHBME
IGHV3-115-9*01 ORANGSUM IGH IMGT ORANGSUM-VGRSN3RMZ
IGHV3-124*01 ORANGSUM IGH IMGT ORANGSUM-VPDBSIYCC
IGHV3-134*01 ORANGSUM IGH IMGT ORANGSUM-VWEAWOVLY
IGHV3-31*01 ORANGSUM IGH IMGT ORANGSUM-VQ5JV55XC
IGHV3-31*02 ORANGSUM IGH IMGT ORANGSUM-VHI6QXP4J
IGHV3-31*03 ORANGSUM IGH IMGT ORANGSUM-V2EW3HSXP
IGHV3-34*01 ORANGSUM IGH IMGT ORANGSUM-VO7QNWNXE
IGHV3-34*02 ORANGSUM IGH IMGT ORANGSUM-VY4M2VDMU
IGHV3-34*03 ORANGSUM IGH IMGT ORANGSUM-VZJNPVYEL
IGHV3-45*01 ORANGSUM IGH IMGT ORANGSUM-VXRTDVPTF
IGHV3-85*01 ORANGSUM IGH IMGT ORANGSUM-VX5WHCIFB
IGHV3-85*02 ORANGSUM IGH IMGT ORANGSUM-VP7FEXPN3
IGHV3-91*01 ORANGSUM IGH IMGT ORANGSUM-VUAUJNETB