AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS ORANGSUM-RAAJK5

SpeciesORANGSUM
TypeV-RS · complete signal, 3' of V (36 nt)
Sources IMGT
GGCAGTG HEPTAMER 7 nt AGAAGTCAGTGTGAGCCCAG spacer · 20 nt ACACAAACC NONAMER 9 nt
Heptamer Spacer (20 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

36 nt
GGCAGTGAGAAGTCAGTGTGAGCCCAGACACAAACC

Find similar RSS

Alleles with this RSS variant

5 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV3-105*01 ORANGSUM IGH IMGT ORANGSUM-VWMEFQGE3
IGHV3-105*02 ORANGSUM IGH IMGT ORANGSUM-VQXQ3DWIP
IGHV3-105*03 ORANGSUM IGH IMGT ORANGSUM-VRMNNRZ3S
IGHV3-110*01 ORANGSUM IGH IMGT ORANGSUM-VCDT7SYVL
IGHV3-110*02 ORANGSUM IGH IMGT ORANGSUM-V6MU2P6SP