AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS ORANGSUM-RLP6RC

SpeciesORANGSUM
TypeV-RS · complete signal, 3' of V (28 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt CTACATCCTCGA spacer · 12 nt ACAGAAACC NONAMER 9 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
CACAGTGCTACATCCTCGAACAGAAACC

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Alleles with this RSS variant

5 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGKV2-49*01 ORANGSUM IGK IMGT ORANGSUM-VWLYM5VL7
IGKV2-49*02 ORANGSUM IGK IMGT ORANGSUM-VYWVYHQRV
IGKV2-50*01 ORANGSUM IGK IMGT ORANGSUM-V4GOYCMR4
IGKV2-50*02 ORANGSUM IGK IMGT ORANGSUM-VQ2BP2H3O
IGKV2-61*01 ORANGSUM IGK IMGT ORANGSUM-VSVQF7LZA