AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

RSS PIG-RFEAEQ

SpeciesPIG
TypeJ-RS · complete signal, 5' of J (28 nt)
Sources IMGT
GGTTTTTGT NONAMER 9 nt CCTGGGCCTCAG spacer · 12 nt GGCTGTG HEPTAMER 7 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
GGTTTTTGTCCTGGGCCTCAGGGCTGTG

Find similar RSS

Alleles with this RSS variant

2 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
TRBJ2-3*01 PIG TRB IMGT PIG-JM2BEUGPK
TRBJ3-3*01 PIG TRB IMGT PIG-JCPXUFZN4