AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS PLATYPUS-RCET6C

SpeciesPLATYPUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt AGAGAAACCACATTCTGTGCCTG spacer · 23 nt TCAGAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGAGAGAAACCACATTCTGTGCCTGTCAGAAACC

Find similar RSS

Alleles with this RSS variant

5 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV1-24*01 PLATYPUS IGH IMGT PLATYPUS-VGQQLHBYH
IGHV1-26*01 PLATYPUS IGH IMGT PLATYPUS-VJDUA6AHU
IGHV1-27*01 PLATYPUS IGH IMGT PLATYPUS-VOEZLLSEL
IGHV1-30*01 PLATYPUS IGH IMGT PLATYPUS-VCBGVW6KI
IGHV1-31*01 PLATYPUS IGH IMGT PLATYPUS-VTW7GFMGV