AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RABBIT-RJYFPR

SpeciesRABBIT
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGCC HEPTAMER 7 nt CCGCGGAGTCCCCAGTGCTCTGT spacer · 23 nt GCACAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGCCCCGCGGAGTCCCCAGTGCTCTGTGCACAAACC

Find similar RSS

Alleles with this RSS variant

14 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
TRBV5-1*01 RABBIT TRB IMGT RABBIT-VQCJPP7VI
TRBV5-10*01 RABBIT TRB IMGT RABBIT-VB6W4FWBY
TRBV5-11*01 RABBIT TRB IMGT RABBIT-VSZRGXM5D
TRBV5-12*01 RABBIT TRB IMGT RABBIT-VX3RRU2IZ
TRBV5-14*01 RABBIT TRB IMGT RABBIT-VI5JZVOZV
TRBV5-15*01 RABBIT TRB IMGT RABBIT-VVHM6TEZL
TRBV5-16*01 RABBIT TRB IMGT RABBIT-VHUMZWHWC
TRBV5-2*01 RABBIT TRB IMGT RABBIT-V5IDKSMNY
TRBV5-3*01 RABBIT TRB IMGT RABBIT-VQ4MY5XQP
TRBV5-4*01 RABBIT TRB IMGT RABBIT-VIXIPTCZY
TRBV5-5*01 RABBIT TRB IMGT RABBIT-V6Z744SI3
TRBV5-6*01 RABBIT TRB IMGT RABBIT-VOZZWD76K
TRBV5-7*01 RABBIT TRB IMGT RABBIT-VHKDVTCL7
TRBV5-9*01 RABBIT TRB IMGT RABBIT-VCHK6DO5N