AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-R5IM3N

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (40 nt)
Sources MUSA
GACTGTG HEPTAMER 7 nt CATTACTGTATGTGAGGCACTAGG spacer · 24 nt TAAGAAGAC NONAMER 9 nt
Heptamer Spacer (24 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

40 nt
GACTGTGCATTACTGTATGTGAGGCACTAGGTAAGAAGAC

Find similar RSS

Alleles with this RSS variant

2 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV3-6JOO*05_t5a_g6a_g24a_g26a_a27t_g32a_34ccaag38_g42a_c44a_g46a_g59c_c74a_c84a_a109t_c110a_a112t_g114a_a119g_g122c_g123c_126ttcc129_a145g_g156a_g159a_c161t_t162a_c165t_a169t_t172g_a186t_g188a_g190c_a194t_a197g_c198t_t203c_g205c_c207a_g211-_g220a_c223a_g224c_g239a_c243a_c258a_t262c_c265t_c279t_t288a_a293-_297------------------------320 RHESUS IGH MUSA RHESUS-V5D2LB7JG
IGHV3-ZJGS*01_t5a_g6a_g12a_g26a_a27g_g32a_34ccaaga39_g42a_c44a_g46a_g73a_c84a_g112t_c114a_c118a_a119g_g122c_c126t_c127t_g128c_g156a_g159a_c161t_a163g_t164a_t171g_t172a_g184a_a186t_g188a_a194t_a197g_c198t_c201t_g205c_c207a_g211-_c213g_g220a_c223a_g224c_g239a_c243a_t247g_a256t_g261c_t262c_c265t_g267a_c279t_c288a_a290-_a293g_297------------------------320 RHESUS IGH MUSA RHESUS-VPUKLMBSO