AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RCEDQZ

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources MUSA
AACAATG HEPTAMER 7 nt AGGGGACTTCACTGTGAGCATAG spacer · 23 nt ACACAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
AACAATGAGGGGACTTCACTGTGAGCATAGACACAAACC

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Alleles with this RSS variant

1 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV4-HJCG*02_i0c_c1a_a2c_g3c_g4a_g6c_c7t_g9t_c10g_12ttct15_t19-_g22c_g23a_g25t_a26t_a27t_g31t_a33g_t38a_a41c_g42a_c43t_t45c_c47t_a48g_g49c_g57c_t58c_g70a_a77c_t81a_g82t_g83t_t85c_t87c_g88a_i89cataac_c105t_g107c_a110c_g114c_g116a_g119a_c120t_g122a_g123t_c127t_c130t_a131t_c137t_g140a_g141a_a142g_g144t_t149a_t159c_g160a_c163t_t165c_c168g_c169g_a172t_g176a_t177a_c195a_c198t_207actt210_223-------229_t234a_a237c_241------246_c255a_c256a_g258a_t259a_c261t_c263t_c265t_g267a_a268c_g275a_283tttagt288_c290a_g291a_g292t_c296t_c297a_g298a_c300t_g301a_t304c_a308t_c309t_g311a_t312a_g315a_g317a_c318a RHESUS IGH MUSA RHESUS-V2YF6SVEP