AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RE3BVX

SpeciesRHESUS
Type3'D-RS · complete signal, 3' of D (28 nt)
Sources MUSA
ACCCGTG HEPTAMER 7 nt GTCTTTTGCGGG spacer · 12 nt GCTGGAATC NONAMER 9 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
ACCCGTGGTCTTTTGCGGGGCTGGAATC

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Alleles with this RSS variant

2 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHD1-C7RJ*01_i0gtggcttttgcaaattccccttgtagtagtaa_t2a_a3c_g10c_12tgtgagcag20 RHESUS IGH MUSA RHESUS-DYHSUVJFF
IGHD3-72Z4*02_i0gtggcttttgc_g1a_t2a_a6c_t8c_a9c_g11t_g17a_t19-_t22a_29gggcatgtgagcag42 RHESUS IGH MUSA RHESUS-DBKN24QGK