AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RF52FG

SpeciesRHESUS
Type3'D-RS · complete signal, 3' of D (28 nt)
Sources MUSA
CACATTT HEPTAMER 7 nt GCATAAACAATT spacer · 12 nt GCAGTTAAT NONAMER 9 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
CACATTTGCATAAACAATTGCAGTTAAT

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Alleles with this RSS variant

5 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHD4-74CP*01_i0ga_t1a_a3g_g8-_g9-_a11g_c13t_a15t_17tttg20 RHESUS IGH MUSA RHESUS-DIVAP6QJA
IGHD4-KMEY*01_i0tacaggaaatggtca_g2t_g8a_t10a_i11g_17tcatttctttg27 RHESUS IGH MUSA RHESUS-DSL4ZP7BC
IGHD4-KMEY*01_i0tacaggaaatggtca_g2t_g8a_t10a_i11g_17tcatttttttg27 RHESUS IGH MUSA RHESUS-DEB3J24QS
IGHD4-ZLQB*01_i0ga_t1a_a3g_i7t_a11t_a12t_15ttg17 RHESUS IGH MUSA RHESUS-DBRJ6IQSD
IGHD4-ZLQB*01_i0ga_t1a_a3g_i7t_a11t_a12t_c13t_15ttg17 RHESUS IGH MUSA RHESUS-DZ4FAHBMM