AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RFITZQ

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (27 nt)
Sources MUSA
GTCAGTG HEPTAMER 7 nt TGAGCCCAGAC spacer · 11 nt ACAAACCCC NONAMER 9 nt
Heptamer Spacer (11 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

27 nt
GTCAGTGTGAGCCCAGACACAAACCCC

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Alleles with this RSS variant

1 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGKV2-QNWI*01_i0ctggtggagtct_a2g_t3g_t5g_t6a_t8g_g9c_a10t_a13g_c14t_t15c_t19c_22gggggg27_34agac37_a40t_t42c_c43t_t44g_g47c_49gcct52_g54t_c56g_c57a_c59t_t62c_c65t_c66t_t67g_69tgat72_c74a_a76g_78catgca83_c85t_t86g_t87g_a90c_i91g_a92c_t96g_100ctcc103_a106g_c110g_c111g_t112g_t116g_a119g_t121g_t125c_a126t_128------133_g135t_139ttagt143_c145a_t147a_149tggtaaaa156_158cgta161_t163a_a164c_c166a_a167c_g169c_t171g_t193a_a196-_a197-_g201t_204-----a209_t212g_c215g_g220t_a221t_g224c_a225c_t226a_a229t_g230c_g232a_234agacaac240_a249c_g250a_g251a_254actcgc259_c261g_a262t_a264t_a268c_c273g_a279c_g280c_g283a_a284g_g285a_t288c_294cacg297_g299c_a300c_t303g_c312-_a313-_g315a_a317t_g320a_t321g_c327g_330aggcgag336 RHESUS IGK MUSA RHESUS-V2GH3KA2H