AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RIKLKU

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources MUSA
CACAGTG HEPTAMER 7 nt AGGAGAAATCATTGTGAGTTCAG spacer · 23 nt ACGCAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGAGGAGAAATCATTGTGAGTTCAGACGCAAACC

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Alleles with this RSS variant

1 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV4-53JX*15_a2-_g3t_c7t_a8t_g9t_12----c16_20gcact24_c26t_g36t_t45c_g48a_g49c_g57c_c65t_c69t_t72c_g73a_80catt83_i89caaac_c105t_g107c_a110c_a113g_g119t_g128a_c129t_c136g_g145a_g146a_t149c_g150a_g153c_g155t_t159c_g160a_a163t_a164g_t165c_t167c_t168a_a170c_g172c_g173a_a175g_t177g_a184g_t185g_t186a_c188t_g190c_g191a_c194a_196ctaac200_a202c_c205t_c209-_c211a_t212a_c213g_a215g_g224c_t227g_c228t_t234c_a237c_g241t_a242c_g246a_i247g_c249a_g252a_c255a_c261t_c263t_g267a_a268c_c278a_t279c_g280c_c284a_g286a_c287a_c290a_g292t_g297a_g301a_g303t_t304a_a308t_c309t_g311a_g313a_c314a_g315a_g317t_321a321 RHESUS IGH MUSA RHESUS-V5CLI6TNU