AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RIMLE5

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (27 nt)
Sources MUSA
CACCGTG HEPTAMER 7 nt GTGCACCCTAT spacer · 11 nt GCACAAAAC NONAMER 9 nt
Heptamer Spacer (11 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

27 nt
CACCGTGGTGCACCCTATGCACAAAAC

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Alleles with this RSS variant

1 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGKV1-436A*09_7atcc10_c14g_t19a_t21g_t25g_c27a_t34a_t40c_g43c_t44c_c51g_g53c_a58t_a64t_t66c_g71a_g72a_a75c_a80c_g81a_a82c_c84t_t87a_a106c_108tggtg112_t114a_t115a_a118t_a119c_t124a_a125t_t126c_a128g_c130a_a131t_g132a_c137t_a138t_g141a_a142c_g145a_c146g_c147a_c149t_a151g_g153a_t155c_g159t_c162a_a164c_a166c_g168t_c170t_a171c_t193a_c195t_t198c_202gcccca207_g210t_t220g_a222c_a223c_t227a_g232a_g236a_t237g_a240g_t247a_c248g_g252c_255cagc258_c261t_a262g_c263t_c269g_c276t_a277g_g278a_a290g_a291g_t294c_g295t_t296c_c299g_a300g_c302a_t303g_t312c_c313a_a314t_g320a_t321c_327gtgg330_333aac335 RHESUS IGK MUSA RHESUS-VQFNYY4ID