AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RJDHQF

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources MUSA
CACAGTG HEPTAMER 7 nt TGAAAACCCACATCCTGAGAATG spacer · 23 nt TCAGAAAGC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGTGAAAACCCACATCCTGAGAATGTCAGAAAGC

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Alleles with this RSS variant

3 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV1-TCEU*02_c6g_g18c_c21t_a38g_c43t_c61a_g72t_g73t_c74t_t81-_a83c_t88a_t90c_a106t_112-------118_a127c_g128a_g133t_g140a_t146g_a152t_g153t_t163c_t168c_g188a_t192c_g196a_a200g_c201t_a204c_a209t_a210g_c213t_g226c_a232t_g246c_g254a_c264t_a265g_g291a_c296t_c300-_g301-_t312c_g315a_g319c RHESUS IGH MUSA RHESUS-VUKXHZ3YJ
IGHV1-TCEU*02_c6g_g18c_c21t_a38g_c43t_c61g_g72t_g73t_c74t_a83-_t88a_t90c_a106t_112-------118_a127c_g128a_g133t_g140a_t146g_a152t_g153t_t163c_t168c_g188a_t192c_g196a_a200g_c201t_a204c_a209t_a210g_c213t_g226c_a232t_g246c_g254a_c264t_a265g_g291a_c296t_c300-_g301-_t312c_g315a_g319c RHESUS IGH MUSA RHESUS-VGHZQ7H6B
IGHV1-TCEU*02_c6g_g18c_c21t_a38g_c43t_c61g_g72t_g73t_c74t_t81-_a83c_t88a_t90c_a106t_112-------118_a127c_g128a_g133t_g140a_t146g_a152t_g153t_t163c_t168c_g188a_t192c_g196a_a200g_c201t_a204c_a209t_a210g_c213t_g226c_a232t_g246c_g254a_c264t_a265g_g291a_c296t_c300-_g301-_t312c_g315a_g319c RHESUS IGH MUSA RHESUS-VYUKAJ44T