RSS RHESUS-RM3U3Z

Species	RHESUS
Type	V-RS · complete signal, 3' of V (39 nt)
Sources	MUSA

Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt

CTAAGTGATGGGAAGTCAGTGTGAGACAAGACACAAAAT

Find similar RSS

Alleles with this RSS variant

7 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele name	Species	Locus	Source of this allele–RSS link	Server UID
IGHV3-2UXX*04_g1a_2ctta5_c7t_c10t_g12c_g13a_a17t_c20a_23tgtcc27_g31c_g32a_t34c_37tcat40_g49a_c53t_c55t_a58c_c61-_t62-_g68a_g70t_g112t_c114a_c118a_a119g_g123a_g128a_c134t_g141a_g151a_g153t_g156a_g159a_c161t_t164a_g165t_t169a_t171g_g175a_a194t_c201t_g205c_g211c_a221g_c222t_c223a_c231t_a232g_c234a_g239a_g241t_c243a_c248t_a250g_a256t_262-------------------280_288-----292_c294a_c296t_t307c_g315t_a316t_321aa322	RHESUS	IGH	MUSA	RHESUS-VQDF2J6EW
IGHV3-2UXX*04_g1a_2ctta5_c7t_c10t_g12c_g13a_a17t_c20a_23tgtcc27_g31c_g32a_t34c_37tcat40_g49a_c53t_c55t_a58c_c61-_t62-_g68a_g70t_g112t_c114a_c118a_a119g_g123a_g128a_c134t_g141a_g151a_g153t_g156a_g159a_c161t_t164a_g165t_t169a_t171g_g175a_a194t_c201t_g205c_g211c_a221g_c222t_c223a_c231t_a232g_c234a_g239a_g241t_c243a_c248t_a256t_262-------------------280_288-----292_c294a_c296t_t307c_g315t_a316t_321aa322	RHESUS	IGH	MUSA	RHESUS-VTMR2FLM6
IGHV3-2UXX*04_g1a_2ctta5_c7t_c10t_g12c_g13a_a17t_c20a_23tgtcc27_g31t_g32a_t34c_37tcat40_g49a_c53t_c55t_a58c_g68a_g112t_c114a_c118a_a119g_c120g_g123a_g128a_c134t_g141a_g151a_g153t_g156a_g159a_c161t_t164a_g165t_t169a_t171g_g175a_a194t_c201t_g205c_g211c_a221g_c222t_c223a_c231t_a232g_c234a_g239a_g241t_c243a_c248t_a250g_a256t_262-------------------280_288-----292_c294a_c296t_g301a_t307c_g315t_a316t_321aa322	RHESUS	IGH	MUSA	RHESUS-V2IOF4IGA
IGHV3-2UXX*04_i0ct_g1a_2ctta5_c7t_c10t_g12c_g13a_a17t_c20a_23tgtcc27_g31c_g32a_t34c_37tcat40_g49a_c53t_c55t_a58c_c61-_t62-_g68a_g112t_c114a_c118a_a119g_g123a_g128a_c134t_g141a_g151a_g153t_g156a_g159a_c161t_t164a_g165t_t169a_t171g_g175a_a194t_a197g_c201t_g205c_g211c_a221g_c222t_c223a_c231t_a232g_c234a_g241t_c248t_a250g_a256t_262-------------------280_288-----292_c294a_c296t_t307c_g315t_a316t_321aa322	RHESUS	IGH	MUSA	RHESUS-VA5WB25EB
IGHV3-2UXX*04_i0ct_g1a_2ctta5_c7t_c10t_g12c_g13a_a17t_c20a_23tgtcc27_g31c_g32a_t34c_37tcat40_g49a_c53t_c55t_a58c_c61-_t62-_g68a_g70t_g112t_c114a_c118a_a119g_g123a_g128a_c134t_g141a_g151a_g153t_g156a_g159a_c161t_t164a_g165t_t169a_t171g_g175a_a194t_c201t_g205c_g211c_a221g_c222t_c223a_c231t_a232g_c234a_g239a_g241t_c243a_c248t_a250g_a256t_262-------------------280_288-----292_c294a_c296t_t307c_g315t_a316t_321aa322	RHESUS	IGH	MUSA	RHESUS-VKH47UB6X
IGHV3-2UXX*04_i0ct_g1a_2ctta5_c7t_c10t_g12c_g13a_a17t_c20a_23tgtcc27_g31c_g32a_t34c_37tcat40_g49a_c53t_c55t_a58c_c61-_t62-_g68a_g70t_g112t_c114a_c118a_a119g_g123a_g128a_c134t_g141a_g151a_g153t_g156a_g159a_c161t_t164a_g165t_t169a_t171g_g175a_a194t_c201t_g205c_g211c_a221g_c222t_c223a_c231t_a232g_c234a_g239a_g241t_c243a_c248t_a256t_262-------------------280_288-----292_c294a_c296t_t307c_g315t_a316t_321aa322	RHESUS	IGH	MUSA	RHESUS-V7VGVG2V3
IGHV3-2UXX*08_i0g_g1t_g3t_c7t_a8c_g9c_11-----------------27_g31-_g32a_t34c_37tcat40_g49a_g50a_c53t_c55t_a58c_g59a_g68a_t111c_g112t_c114a_c118a_a119g_c120g_g123a_g128a_c134t_g141a_g151a_g153t_g156a_g159a_c161t_t164a_t169a_c170a_g175a_a190c_a194t_c201t_g205c_g211c_a221g_c222t_c223a_c231t_a232g_c234a_g239a_g241t_c243a_c248t_a250g_a256t_261------------------------284_t287g_g288a_g292t_c294a_c296t_t307c_g315t_a316t_321aa322	RHESUS	IGH	MUSA	RHESUS-VOXIDEVST