AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RN5C5B

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (27 nt)
Sources MUSA
CCCCGGG HEPTAMER 7 nt CGCCTCCTGTA spacer · 11 nt CAAGAACCC NONAMER 9 nt
Heptamer Spacer (11 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

27 nt
CCCCGGGCGCCTCCTGTACAAGAACCC

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Alleles with this RSS variant

1 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGKV1-B6M4*04_i0gcgctggtgaaaccca_g1c_t5g_t6a_8cctcacg14_16tgac19_c22g_t25c_c27t_c30t_t34g_c35g_g37t_t39-_t42a_g43c_a45c_g46a_48cact51_a54t_t56g_c57t_59tgggtgtgg67_c70t_73atcc76_g82c_g83c_a85t_t86c_t87a_a106c_c108g_110agaccc115_a117g_a118g_t120g_t124c_a125t_c127g_a128c_g129a_g132c_134tttatt139_a142g_a144t_146atga149_t155g_157-----------167_g169a_193gcaca197_t199c_g201c_g202t_c203g_t207a_g209c_g210a_t212g_c214t_t220-_a222c_g224t_g225c_t227c_g230a_c231g_g233a_236---cc240_249caaa252_c254a_a255c_g256c_t258g_t259g_c261g_a262g_c263t_c267g_c270a_c273g_g275c_g278a_c280a_c283g_g285c_a290t_a291g_294caca297_a300c_t303a_c313g_t314c_a317g_i318a_t319g_t321c_a322c_t327a_c331a_333ag334 RHESUS IGK MUSA RHESUS-VS4JECWX4