AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RNTBEN

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT MUSA
CACAGTG HEPTAMER 7 nt TGAAAACCCACATCCTGAGAGTG spacer · 23 nt TCAGAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGTGAAAACCCACATCCTGAGAGTGTCAGAAACC

Find similar RSS

Alleles with this RSS variant

17 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV1-198*02 RHESUS IGH IMGT MUSA RHESUS-VMRLKOHTR
IGHV1-198*03 RHESUS IGH IMGT MUSA RHESUS-VRGAX52FL
IGHV1-200*01 RHESUS IGH IMGT RHESUS-VSW2ATT4H
IGHV1-200*02 RHESUS IGH IMGT MUSA RHESUS-VGJYOUCAS
IGHV1-130*04 RHESUS IGH IMGT RHESUS-V23IXIXME
IGHV1-90*01 RHESUS IGH IMGT RHESUS-VLTQ354PP
IGHV1-90*02 RHESUS IGH IMGT RHESUS-VISZO3TEJ
IGHV1-60*01_S7772 RHESUS IGH MUSA RHESUS-VRLOB3QVM
IGHV1-4B2U*03_a18g_a49g_a72g_g140a_g153c_a275g RHESUS IGH MUSA RHESUS-VIYRCDMVL
IGHV1-4B2U*06 RHESUS IGH MUSA RHESUS-VMVTLHPYC
IGHV1-4B2U*06_g18a_t81c_a113g RHESUS IGH MUSA RHESUS-VY4QFONC6
IGHV1-138*01_S9115 RHESUS IGH MUSA RHESUS-VLIBU2KAJ
LJI.Rh_IGHV1.58.a RHESUS IGH MUSA RHESUS-VRF6AF2SR
IGHV1-198*04 RHESUS IGH MUSA RHESUS-V72PULRXC
LJI.Rh_IGHV1.60 RHESUS IGH MUSA RHESUS-VVWVXQKZJ
IGHV1-I24O*01_t112a_a140g RHESUS IGH MUSA RHESUS-VVIXCGZYK
IGHV1-JHF7*01_t11a_a40c_a63c_c78t_c90t_g106a_a107g_110ctgtt114_c120g_c139g_g147c_g151c_g159a_t163c_a169t_a170g_c189t_g210c_g239c_a240g_a246g_g249c_a263g_321ca322 RHESUS IGH MUSA RHESUS-VNWMR3LAO