AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-ROFCPI

SpeciesRHESUS
Type5'D-RS · complete signal, 5' of D (29 nt)
Sources MUSA
GGCCTCAGT NONAMER 9 nt GAGACCCCCAAAA spacer · 13 nt GACCCTG HEPTAMER 7 nt
Heptamer Spacer (13 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

29 nt
GGCCTCAGTGAGACCCCCAAAAGACCCTG

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Alleles with this RSS variant

2 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHD12-7HR7*02_g1c_t2a_a3g_c4t_g9c_a12g_t16c_a18t_t19a_22aga24 RHESUS IGH MUSA RHESUS-DV42EQOTW
IGHD12-7HR7*02_g1c_t2a_a3g_c4t_g9c_a12g_t16c_a18t_t19a_22agaaaatatgt32 RHESUS IGH MUSA RHESUS-DV72OEZ2T