AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RP5UF6

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources MUSA
CACAGTG HEPTAMER 7 nt AGGGGAGGTGAGTGTGAGCCCAG spacer · 23 nt ACACCTCCC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGAGGGGAGGTGAGTGTGAGCCCAGACACCTCCC

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Alleles with this RSS variant

5 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV4-NL_3*01_S7864 RHESUS IGH MUSA RHESUS-VXK3BGIT2
IGHV4-NL_3*01_S7576 RHESUS IGH MUSA RHESUS-VZSGMQQ47
IGHV4-BJNS*03_c87t_a104-_t105-_a106-_a147g RHESUS IGH MUSA RHESUS-VCMTA52IK
IGHV4-NL_3*01_S1577 RHESUS IGH MUSA RHESUS-VZWGUR26O
IGHV4-BJNS*04_a119g_a132g RHESUS IGH MUSA RHESUS-VLXAYPYE5