AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RPB4MX

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (28 nt)
Sources MUSA
CACAGTG HEPTAMER 7 nt GTACATCCTCGA spacer · 12 nt GCAGAAACC NONAMER 9 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
CACAGTGGTACATCCTCGAGCAGAAACC

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Alleles with this RSS variant

6 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGKV2-5WB2*03_333tcc335 RHESUS IGK MUSA RHESUS-VQFAZR2HS
IGKV2-5WB2*02_c52t_c137g_t170g_c198g_c204t_t273c RHESUS IGK MUSA RHESUS-VQL55LYDR
IGKV2-AEM*01 RHESUS IGK MUSA RHESUS-VNQFBLG55
IGKV2-5WB2*01_t221a_t312c_333tcc335 RHESUS IGK MUSA RHESUS-VDYY46XIR
IGKV2-5WB2*01_g198c_333tcc335 RHESUS IGK MUSA RHESUS-VUCH6GHV6
IGKV2-5WB2*01_c27t_a33g_c36t_c41t_c42t_t221a_t312c_333tcc335 RHESUS IGK MUSA RHESUS-V73TZYIH5